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  5. LOC_Os07g38730

LOC_Os07g38730


Description : tubulin/FtsZ domain containing protein, putative, expressed


Gene families : OG_42_0000484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g38730
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
A4A49_32060 No alias tubulin alpha chain 0.03 Orthogroups_2024-Update
Brara.B00841.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.05 Orthogroups_2024-Update
Brara.J01613.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Glyma.04G088500 No alias tubulin alpha-2 chain 0.03 Orthogroups_2024-Update
Kfl00173_0240 kfl00173_0240_v1.1 (q9zrj4|tba_chlvu : 789.0) Tubulin alpha chain -... 0.01 Orthogroups_2024-Update
PSME_00000844-RA No alias (at1g50010 : 848.0) Encodes alpha-2,4 tubulin. TUA2 and... 0.02 Orthogroups_2024-Update
Sobic.001G107200.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Sopen12g030180 No alias Tubulin/FtsZ family, GTPase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!