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  5. LOC_Os07g47710

LOC_Os07g47710


Description : 60S ribosomal protein L22-2, putative, expressed


Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g47710
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
270704 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
A4A49_00389 No alias 60s ribosomal protein l22-2 0.03 Orthogroups_2024-Update
At1g02830 No alias Putative 60S ribosomal protein L22-1... 0.02 Orthogroups_2024-Update
Brara.A03699.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.C03109.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.E03358.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre07.g357850 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
GRMZM2G063617 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Glyma.10G018200 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Glyma.19G232700 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Glyma.20G237000 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
HORVU2Hr1G019160.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00104_0130 kfl00104_0130_v1.1 (at5g27770 : 144.0) Ribosomal L22e protein family;... 0.03 Orthogroups_2024-Update
PSME_00024504-RA No alias (at3g05560 : 145.0) Ribosomal L22e protein family;... 0.05 Orthogroups_2024-Update
Potri.010G012700 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
Potri.013G015300 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
Pp1s283_20V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s457_15V6 No alias 60s ribosomal protein 0.05 Orthogroups_2024-Update
Seita.2G429500.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.9G409100.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.001G376600.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.002G414700.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc01g099830 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) 0.04 Orthogroups_2024-Update
Solyc09g075150 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.03 Orthogroups_2024-Update
Sopen01g043340 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
Sopen09g029980 No alias Ribosomal L22e protein family 0.02 Orthogroups_2024-Update
evm.model.contig_2121.19 No alias (at3g05560 : 87.0) Ribosomal L22e protein family;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 20 128
No external refs found!