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  5. LOC_Os08g01640

LOC_Os08g01640


Description : Rf1, mitochondrial precursor, putative, expressed


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g01640
Cluster HCCA clusters: cluster_0106

Target Alias Description ECC score Gene Family Method Actions
Bradi2g38453 No alias rna processing factor 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G031920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G058700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 127 174
IPR002885 Pentatricopeptide_repeat 660 703
IPR002885 Pentatricopeptide_repeat 306 354
IPR002885 Pentatricopeptide_repeat 200 248
IPR002885 Pentatricopeptide_repeat 551 598
IPR002885 Pentatricopeptide_repeat 376 424
IPR002885 Pentatricopeptide_repeat 477 510
IPR002885 Pentatricopeptide_repeat 514 545
IPR002885 Pentatricopeptide_repeat 268 299
IPR002885 Pentatricopeptide_repeat 443 474
IPR002885 Pentatricopeptide_repeat 92 121
IPR002885 Pentatricopeptide_repeat 625 647
No external refs found!