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  5. LOC_Os08g02210

LOC_Os08g02210


Description : expressed protein


Gene families : OG_42_0001407 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g02210
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
At1g03055 No alias Beta-carotene isomerase D27, chloroplastic... 0.05 Orthogroups_2024-Update
At1g64680 No alias At1g64680 [Source:UniProtKB/TrEMBL;Acc:Q9SGU7] 0.02 Orthogroups_2024-Update
Brara.I01257.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I01378.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I05544.1 No alias carotenoid isomerase *(DWARF27) 0.05 Orthogroups_2024-Update
Glyma.02G088200 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU7Hr1G076030.9 No alias Unknown function 0.04 Orthogroups_2024-Update
Mp6g03970.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.03 Orthogroups_2024-Update
Pp1s6_190V6 No alias F1N19.25; expressed protein [Arabidopsis thaliana] 0.05 Orthogroups_2024-Update
Solyc06g084610 No alias cotton fiber protein (AHRD V3.3 -** AT5G61710.1) 0.02 Orthogroups_2024-Update
Sopen08g004470 No alias Domain of unknown function (DUF4033) 0.02 Orthogroups_2024-Update
evm.model.tig00001155.3 No alias (at4g01995 : 124.0) unknown protein; BEST Arabidopsis... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025114 DUF4033 151 233
No external refs found!