Description : DNA binding protein, putative, expressed
Gene families : OG_42_0002455 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002455_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os08g08000 | |
Cluster | HCCA clusters: cluster_0019 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g14375 | No alias | Helicase/SANT-associated, DNA binding protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g41720 | No alias | Helicase/SANT-associated, DNA binding protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G018142 | No alias | Helicase/SANT-associated, DNA binding protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G316740 | No alias | Helicase/SANT-associated, DNA binding protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G440951 | No alias | Helicase/SANT-associated, DNA binding protein | 0.03 | Orthogroups_2024-Update | |
Kfl00231_0110 | kfl00231_0110_v1.1 | (at3g24870 : 95.5) Helicase/SANT-associated, DNA binding... | 0.01 | Orthogroups_2024-Update | |
Pp1s6_392V6 | No alias | dna binding | 0.02 | Orthogroups_2024-Update | |
Pp1s87_101V6 | No alias | dna binding | 0.02 | Orthogroups_2024-Update | |
Seita.5G259200.1 | No alias | component *(EAF1) of NuA4 histone acetyltransferase complex | 0.03 | Orthogroups_2024-Update | |
Sobic.003G196300.2 | No alias | component *(EAF1) of NuA4 histone acetyltransferase complex | 0.02 | Orthogroups_2024-Update | |
Sopen09g023690 | No alias | HSA | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0004592 | pantoate-beta-alanine ligase activity | IEP | Predicted GO |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
BP | GO:0015939 | pantothenate metabolic process | IEP | Predicted GO |
BP | GO:0015940 | pantothenate biosynthetic process | IEP | Predicted GO |
BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
CC | GO:0016459 | myosin complex | IEP | Predicted GO |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
CC | GO:0030131 | clathrin adaptor complex | IEP | Predicted GO |
MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
MF | GO:0050080 | malonyl-CoA decarboxylase activity | IEP | Predicted GO |
MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |