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  5. LOC_Os08g08790

LOC_Os08g08790


Description : ubiquitin family protein, putative, expressed


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os08g08790
Cluster HCCA clusters: cluster_0115

Target Alias Description ECC score Gene Family Method Actions
Bradi2g12323 No alias ubiquitin extension protein 1 0.02 Orthogroups_2024-Update
Bradi4g13202 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
HORVU7Hr1G103160.4 No alias UBQ ubiquitin-fold protein 0.01 Orthogroups_2024-Update
MA_93495g0010 No alias (at4g05320 : 654.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
Solyc06g053210 No alias Ubiquitin (AHRD V3.3 *** J7G5B5_ROSRU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 94 166
No external refs found!