1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g25700

LOC_Os08g25700


Description : expressed protein


Gene families : OG_42_0008054 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008054_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g25700
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Bradi3g22350 No alias Function unknown 0.04 Orthogroups_2024-Update
Brara.G00438.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.20G060000 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.014G169200 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.6G120800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G101300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g045300 No alias transmembrane protein (AHRD V3.3 *** AT2G04360.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006189 'de novo' IMP biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!