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  5. Solyc08g074390

Solyc08g074390


Description : Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SPT8_RICCO)


Gene families : OG_42_0000342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g074390
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
At4g17180 No alias O-Glycosyl hydrolases family 17 protein... 0.02 Orthogroups_2024-Update
At4g31140 No alias Glucan endo-1,3-beta-glucosidase 5... 0.03 Orthogroups_2024-Update
HORVU0Hr1G010040.2 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU6Hr1G019670.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU6Hr1G091770.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
LOC_Os11g36940 No alias glucan endo-1,3-beta-glucosidase precursor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G216700 No alias O-Glycosyl hydrolases family 17 protein 0.02 Orthogroups_2024-Update
Pp1s197_52V6 No alias glucan endo- -beta-glucosidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR012946 X8 366 435
IPR000490 Glyco_hydro_17 27 344
No external refs found!