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  5. LOC_Os08g33540

LOC_Os08g33540


Description : ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed


Gene families : OG_42_0004685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g33540
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
Bradi3g36600 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Orthogroups_2024-Update
Brara.B01807.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.06 Orthogroups_2024-Update
Brara.G02508.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.05 Orthogroups_2024-Update
Cre17.g696400 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.01 Orthogroups_2024-Update
Glyma.09G187300 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.05 Orthogroups_2024-Update
Kfl00104_0150 kfl00104_0150_v1.1 (at1g68660 : 152.0) Ribosomal protein L12/ ATP-dependent... 0.01 Orthogroups_2024-Update
Pp1s32_331V6 No alias atp-dependent clp protease adaptor protein containing protein 0.01 Orthogroups_2024-Update
Pp1s40_52V6 No alias atp-dependent clp protease adaptor protein containing protein 0.03 Orthogroups_2024-Update
Seita.6G157200.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
Sobic.007G135800.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.05 Orthogroups_2024-Update
Solyc03g119700 No alias ATP-dependent Clp protease adaptor protein ClpS (AHRD... 0.03 Orthogroups_2024-Update
Sopen03g038530 No alias ATP-dependent Clp protease adaptor protein ClpS 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003769 ClpS_core 82 148
No external refs found!