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  5. LOC_Os08g34010

LOC_Os08g34010


Description : ZF-HD protein dimerisation region containing protein, expressed


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g34010
Cluster HCCA clusters: cluster_0120

Target Alias Description ECC score Gene Family Method Actions
A4A49_39318 No alias zinc-finger homeodomain protein 9 0.03 Orthogroups_2024-Update
At2g18350 No alias Zinc-finger homeodomain protein 6... 0.03 Orthogroups_2024-Update
Brara.G02231.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.02G056100 No alias homeobox protein 24 0.04 Orthogroups_2024-Update
Glyma.02G180800 No alias homeobox protein 22 0.03 Orthogroups_2024-Update
Glyma.20G075300 No alias homeobox protein 22 0.03 Orthogroups_2024-Update
Potri.019G021400 No alias homeobox protein 21 0.02 Orthogroups_2024-Update
Pp1s491_6V6 No alias ZF-HD homeobox protein At4g24660 (AtHB-22) [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.005G019800.2 No alias zf-HD-type transcription factor 0.04 Orthogroups_2024-Update
Sopen04g034080 No alias ZF-HD protein dimerisation region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019213 deacetylase activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 38 90
No external refs found!