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LOC_Os08g38570


Description : WD domain, G-beta repeat domain containing protein, expressed


Gene families : OG_42_0006904 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g38570
Cluster HCCA clusters: cluster_0054

Target Alias Description ECC score Gene Family Method Actions
PSME_00030307-RA No alias (at1g49540 : 99.0) elongator protein 2 (ELP2); FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 128 160
IPR001680 WD40_repeat 413 450
IPR001680 WD40_repeat 229 269
IPR001680 WD40_repeat 644 678
IPR001680 WD40_repeat 692 727
No external refs found!