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Description : 40S ribosomal protein S25, putative, expressed
Gene families : OG_42_0001610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001610_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os08g44480 | |
| Cluster | HCCA clusters: cluster_0054 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At2g21580 | No alias | 40S ribosomal protein S25-2... | 0.02 | Orthogroups_2024-Update | |
| Bradi3g42900 | No alias | Ribosomal protein S25 family protein | 0.03 | Orthogroups_2024-Update | |
| Bradi4g38580 | No alias | Ribosomal protein S25 family protein | 0.04 | Orthogroups_2024-Update | |
| Brara.A00031.1 | No alias | component *(eS25) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Brara.D01272.1 | No alias | component *(eS25) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Cre08.g382500 | No alias | Ribosomal protein S25 family protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.11G115400 | No alias | Ribosomal protein S25 family protein | 0.03 | Orthogroups_2024-Update | |
| Seita.2G134200.1 | No alias | component *(eS25) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Seita.6G248800.1 | No alias | component *(eS25) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G338966.1 | No alias | component *(eS25) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Sopen01g012450 | No alias | S25 ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| Sopen02g019010 | No alias | S25 ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| Sopen06g020450 | No alias | S25 ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| Sopen10g017830 | No alias | S25 ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| Sopen10g023380 | No alias | S25 ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2033.4 | No alias | (at4g34555 : 106.0) Ribosomal protein S25 family... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0004424 | imidazoleglycerol-phosphate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004977 | Ribosomal_S25 | 9 | 105 |
| No external refs found! |