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  5. LOC_Os09g02260

LOC_Os09g02260


Description : PPR repeat containing protein, putative, expressed


Gene families : OG_42_0009556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009556_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os09g02260
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
MA_12748g0020 No alias (at1g79540 : 502.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 447 479
IPR002885 Pentatricopeptide_repeat 412 443
IPR002885 Pentatricopeptide_repeat 533 581
IPR002885 Pentatricopeptide_repeat 240 289
IPR002885 Pentatricopeptide_repeat 170 219
IPR002885 Pentatricopeptide_repeat 345 394
IPR002885 Pentatricopeptide_repeat 679 707
IPR002885 Pentatricopeptide_repeat 315 343
IPR002885 Pentatricopeptide_repeat 607 628
No external refs found!