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LOC_Os09g20040


Description : resistance-like protein I2GA-SH194-2, putative, expressed


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g20040
Cluster HCCA clusters: cluster_0115

Target Alias Description ECC score Gene Family Method Actions
A4A49_23434 No alias putative disease resistance protein rga3 0.02 Orthogroups_2024-Update
Bradi4g22740 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Brara.E02675.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.19G109267 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G002440.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G126440.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.006G273966 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.2G011300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g011610 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 468 698
IPR005175 PPC_dom 130 230
No external refs found!