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  5. Solyc08g077670

Solyc08g077670


Description : LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g077670
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Brara.C03948.1 No alias regulatory protein *(CLSY3/4) of transacting siRNA pathway 0.04 Orthogroups_2024-Update
Brara.J00372.1 No alias regulatory protein *(CLSY3/4) of transacting siRNA pathway 0.03 Orthogroups_2024-Update
LOC_Os06g14440 No alias DRD1, putative, expressed 0.03 Orthogroups_2024-Update
Seita.9G461000.1 No alias RDR2-polymerase accessory protein *(CLSY1/2) &... 0.05 Orthogroups_2024-Update
Solyc04g054440 No alias LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 89 291
No external refs found!