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  5. LOC_Os09g21450

LOC_Os09g21450


Description : cyclin, putative, expressed


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g21450
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G097300 No alias CYCLIN D3;2 0.04 Orthogroups_2024-Update
MA_93221g0010 No alias (at1g70210 : 231.0) Encodes a D-type cyclin that... 0.03 Orthogroups_2024-Update
Potri.014G016700 No alias cyclin d5;1 0.02 Orthogroups_2024-Update
Seita.3G370300.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Solyc05g006050 No alias cyclinD1_1 0.03 Orthogroups_2024-Update
Sopen01g049910 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen04g032070 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen12g030550 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 56 182
No external refs found!