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  5. LOC_Os10g03570

LOC_Os10g03570


Description : RGH1A, putative, expressed


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g03570
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
Bradi3g03935 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Bradi3g15595 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Bradi4g44227 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.18G093400 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G012190.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G028220.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G000230.24 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G111700.6 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G317600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G014600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G143000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G130400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G133400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G182600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G062900.4 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G076500.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G092200.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0019213 deacetylase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 179 425
No external refs found!