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  5. LOC_Os10g05240

LOC_Os10g05240


Description : OsFBX369 - F-box domain containing protein, expressed


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g05240
Cluster HCCA clusters: cluster_0131

Target Alias Description ECC score Gene Family Method Actions
Bradi1g56167 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi1g58711 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi1g73744 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi2g02910 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi4g10105 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU4Hr1G018590.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU6Hr1G013370.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os10g05540 No alias OsFBX373 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.9G292000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G014700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G023000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G139400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 30 64
No external refs found!