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  5. LOC_Os10g23050

LOC_Os10g23050


Description : helix-loop-helix DNA-binding protein, putative, expressed


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g23050
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
A4A49_05710 No alias transcription factor bhlh96 0.03 Orthogroups_2024-Update
A4A49_24356 No alias transcription factor fama 0.03 Orthogroups_2024-Update
At3g06120 No alias Transcription factor MUTE... 0.03 Orthogroups_2024-Update
At5g65320 No alias Transcription factor bHLH99... 0.04 Orthogroups_2024-Update
Bradi3g52150 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.B01465.1 No alias regulatory protein *(SPCH) of asymmetric cell division &... 0.03 Orthogroups_2024-Update
Brara.G02363.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I03308.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.04G098400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G078270.2 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G084850.2 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G067000.2 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G079250.1 No alias regulatory protein *(SPCH) of asymmetric cell division &... 0.02 Orthogroups_2024-Update
LOC_Os02g52190 No alias helix-loop-helix DNA-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_141469g0010 No alias (at3g24140 : 154.0) Encodes a basic helix-loop-helix... 0.02 Orthogroups_2024-Update
PSME_00017392-RA No alias (at1g72210 : 165.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Potri.008G202900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.012G031800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G128100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G197500.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sopen00g009860 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 109 160
No external refs found!