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Description : retrotransposon protein, putative, unclassified, expressed
Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os10g24400 | |
| Cluster | HCCA clusters: cluster_0098 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g358542 | No alias | Function unknown | 0.01 | Orthogroups_2024-Update | |
| HORVU0Hr1G011670.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Mpzg00520.1 | No alias | Uncharacterized mitochondrial protein AtMg00860... | 0.02 | Orthogroups_2024-Update | |
| Sopen00g005290 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen01g008200 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen02g004760 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen02g012390 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen03g017250 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen03g019160 | No alias | Reverse transcriptase-like | 0.02 | Orthogroups_2024-Update | |
| Sopen05g010930 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen05g018490 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen05g026240 | No alias | Retroviral aspartyl protease | 0.02 | Orthogroups_2024-Update | |
| Sopen06g011880 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen06g016840 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen07g005780 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.04 | Orthogroups_2024-Update | |
| Sopen08g007650 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen08g011030 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen09g025530 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
| Sopen10g011720 | No alias | Integrase core domain | 0.02 | Orthogroups_2024-Update | |
| Sopen10g028470 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
| Sopen11g009630 | No alias | Integrase core domain | 0.02 | Orthogroups_2024-Update | |
| Sopen11g009960 | No alias | Retrotransposon gag protein | 0.03 | Orthogroups_2024-Update | |
| Sopen11g019880 | No alias | Retroviral aspartyl protease | 0.02 | Orthogroups_2024-Update | |
| Sopen11g022720 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
| MF | GO:0017176 | phosphatidylinositol N-acetylglucosaminyltransferase activity | IEP | Predicted GO |
| CC | GO:0030014 | CCR4-NOT complex | IEP | Predicted GO |
| MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Predicted GO |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005162 | Retrotrans_gag_dom | 110 | 196 |
| No external refs found! |