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  5. Solyc01g090170

Solyc01g090170


Description : ras-related protein Rab-1A


Gene families : OG_42_0001110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g090170
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Bradi2g39760 No alias Ras-related small GTP-binding family protein 0.04 Orthogroups_2024-Update
Kfl00091_0020 kfl00091_0020_v1.1 (q39571|yptc1_chlre : 332.0) GTP-binding protein YPTC1 -... 0.03 Orthogroups_2024-Update
MA_20251g0010 No alias (p40392|ric1_orysa : 330.0) Ras-related protein RIC1 -... 0.04 Orthogroups_2024-Update
Potri.001G152800 No alias RAS 5 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
BP GO:0007264 small GTPase mediated signal transduction IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 233 326
IPR001806 Small_GTPase 375 535
IPR026992 DIOX_N 107 184
No external refs found!