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  5. LOC_Os10g29100

LOC_Os10g29100


Description : MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g29100
Cluster HCCA clusters: cluster_0131

Target Alias Description ECC score Gene Family Method Actions
Bradi3g27067 No alias BTB-POZ and MATH domain 2 0.03 Orthogroups_2024-Update
Glyma.19G116300 No alias BTB-POZ and MATH domain 4 0.03 Orthogroups_2024-Update
HORVU4Hr1G086720.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00037559-RA No alias (at3g03740 : 242.0) BTB-POZ and MATH domain 4 (BPM4);... 0.02 Orthogroups_2024-Update
Sobic.001G158100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G046900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 186 298
IPR002083 MATH/TRAF_dom 44 153
No external refs found!