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  5. LOC_Os10g34960

LOC_Os10g34960


Description : ubiquitin family protein, putative, expressed


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g34960
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G029100.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G029150.2 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
MA_41251g0030 No alias (at4g05320 : 844.0) One of five polyubiquitin genes in... 0.02 Orthogroups_2024-Update
Potri.001G263000 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Potri.005G198700 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
Seita.2G321300.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.006G224400.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G232100.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 177 247
IPR000626 Ubiquitin_dom 72 141
IPR000626 Ubiquitin_dom 5 66
No external refs found!