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  5. LOC_Os10g39590

LOC_Os10g39590


Description : ubiquitin family protein, putative, expressed


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os10g39590
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
A4A49_39502 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Brara.C02747.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Brara.E02153.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Mp4g02740.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Potri.007G123300 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G232100.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 6 77
No external refs found!