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  5. LOC_Os10g41060

LOC_Os10g41060


Description : expressed protein


Gene families : OG_42_0000755 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g41060
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
Bradi1g78487 No alias Plant protein of unknown function (DUF828) with plant... 0.02 Orthogroups_2024-Update
Glyma.02G005100 No alias Plant protein of unknown function (DUF828) with plant... 0.02 Orthogroups_2024-Update
Glyma.05G060600 No alias Plant protein of unknown function (DUF828) with plant... 0.03 Orthogroups_2024-Update
PSME_00028830-RA No alias (at4g14740 : 291.0) FUNCTIONS IN: phosphoinositide... 0.03 Orthogroups_2024-Update
Sobic.004G295200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g066860 No alias LOW QUALITY:Auxin canalization protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen09g027340 No alias Auxin canalisation 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013666 PH_pln 260 363
IPR008546 DUF828 33 84
IPR008546 DUF828 102 247
No external refs found!