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  5. LOC_Os10g42490

LOC_Os10g42490


Description : homeobox and START domains containing protein, putative, expressed


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g42490
Cluster HCCA clusters: cluster_0052

Target Alias Description ECC score Gene Family Method Actions
AC235534.1_FG007 No alias homeodomain GLABROUS 1 0.03 Orthogroups_2024-Update
At1g73360 No alias Homeobox-leucine zipper protein HDG11... 0.02 Orthogroups_2024-Update
Brara.E01141.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G095210.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os07g47130 No alias OCL5 protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G137800 No alias homeobox-7 0.02 Orthogroups_2024-Update
Seita.8G063700.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Solyc05g015030 No alias Homeobox leucine zipper protein (AHRD V3.3 *** A0A072UAM9_MEDTR) 0.02 Orthogroups_2024-Update
Solyc08g062510 No alias Homeobox leucine zipper protein (AHRD V3.3 *** A0A072UAM9_MEDTR) 0.02 Orthogroups_2024-Update
Solyc09g066070 No alias Homeobox leucine zipper protein (AHRD V3.3 *** A0A072UAM9_MEDTR) 0.02 Orthogroups_2024-Update
Solyc10g018000 No alias Homeobox leucine zipper protein (AHRD V3.3 *** A0A072UAM9_MEDTR) 0.03 Orthogroups_2024-Update
Sopen00g010370 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 135 190
IPR002913 START_lipid-bd_dom 350 581
No external refs found!