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  5. Solyc08g082960

Solyc08g082960


Description : HIT zinc finger protein (AHRD V3.3 *** A0A072VFL0_MEDTR)


Gene families : OG_42_0006189 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006189_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g082960
Cluster HCCA clusters: Cluster_258


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR007529 Znf_HIT 22 51
No external refs found!