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  5. LOC_Os11g03910

LOC_Os11g03910


Description : zinc finger DHHC domain-containing protein, putative, expressed


Gene families : OG_42_0000367 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os11g03910
Cluster HCCA clusters: cluster_0144

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G100641 No alias DHHC-type zinc finger family protein 0.04 Orthogroups_2024-Update
LOC_Os01g17160 No alias OsSubt1 - Putative Subtilisin homologue, expressed 0.02 Orthogroups_2024-Update
Solyc02g094390 No alias S-acyltransferase (AHRD V3.3 *** K4BDN4_SOLLC) 0.04 Orthogroups_2024-Update
Sopen07g025950 No alias DHHC palmitoyltransferase 0.03 Orthogroups_2024-Update
Sopen10g028730 No alias DHHC palmitoyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001594 Palmitoyltrfase_DHHC 155 193
IPR001594 Palmitoyltrfase_DHHC 211 296
No external refs found!