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  5. LOC_Os11g17940

LOC_Os11g17940


Description : expressed protein


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g17940
Cluster HCCA clusters: cluster_0055

Target Alias Description ECC score Gene Family Method Actions
Brara.H00434.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G019900 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
LOC_Os03g46570 No alias protein binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g34020 No alias protein binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_114475g0010 No alias (at1g45976 : 149.0) S-ribonuclease binding protein 1... 0.03 Orthogroups_2024-Update
PSME_00040898-RA No alias (at1g10650 : 137.0) SBP (S-ribonuclease binding protein)... 0.03 Orthogroups_2024-Update
Potri.015G118000 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Solyc08g077460 No alias SBP (S-ribonuclease binding protein) family protein... 0.02 Orthogroups_2024-Update
Sopen01g053650 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!