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  5. LOC_Os11g35390

LOC_Os11g35390


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g35390
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
A4A49_12817 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_24145 No alias transcription factor myb108 0.04 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.02 Orthogroups_2024-Update
At1g25340 No alias myb domain protein 116 [Source:TAIR;Acc:AT1G25340] 0.03 Orthogroups_2024-Update
At2g32460 No alias Transcription factor MYB101... 0.02 Orthogroups_2024-Update
At3g01530 No alias Transcription factor MYB57... 0.03 Orthogroups_2024-Update
At4g37780 No alias Transcription factor MYB87... 0.02 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.I03301.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.02 Orthogroups_2024-Update
GRMZM2G051528 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
GRMZM2G160840 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.03G225200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.11G030200 No alias myb domain protein 85 0.02 Orthogroups_2024-Update
Glyma.12G079800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.14G090900 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.19G218800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.20G184200 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
LOC_Os03g18480 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_14061g0010 No alias (at5g57620 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_62361g0010 No alias (at1g66230 : 237.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
PSME_00041970-RA No alias (at1g22640 : 188.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.003G132000 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Potri.008G166700 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Potri.012G127700 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.017G071500 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Seita.3G051800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.8G244100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G201000.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Solyc07g052300 No alias R2R3MYB transcription factor 101 0.04 Orthogroups_2024-Update
Solyc10g005760 No alias R2R3MYB transcription factor 80 0.03 Orthogroups_2024-Update
Sopen02g033980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g033490 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 68 113
No external refs found!