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  5. LOC_Os11g35840

LOC_Os11g35840


Description : expressed protein


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g35840
Cluster HCCA clusters: cluster_0005

Target Alias Description ECC score Gene Family Method Actions
A4A49_38013 No alias lrr receptor-like serinethreonine-protein kinase gso2 0.02 Orthogroups_2024-Update
Bradi3g18400 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Brara.E00937.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.10G228000 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
Glyma.12G123432 No alias receptor like protein 12 0.04 Orthogroups_2024-Update
HORVU6Hr1G010730.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_186385g0010 No alias (at2g34930 : 356.0) disease resistance family protein /... 0.03 Orthogroups_2024-Update
Potri.016G138200 No alias receptor like protein 12 0.03 Orthogroups_2024-Update
Seita.1G122700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G237800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G017000.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G130700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g008600 No alias LOW QUALITY:Leucine-rich receptor-like kinase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 31 69
IPR001611 Leu-rich_rpt 1362 1421
IPR001611 Leu-rich_rpt 679 737
IPR001611 Leu-rich_rpt 1060 1118
IPR001611 Leu-rich_rpt 442 501
IPR001611 Leu-rich_rpt 607 665
IPR001611 Leu-rich_rpt 370 430
IPR001611 Leu-rich_rpt 110 124
IPR001611 Leu-rich_rpt 1179 1194
IPR001611 Leu-rich_rpt 751 772
No external refs found!