LOC_Os11g41875

Description : membrane protein, putative, expressed

Gene families : OG_42_0002731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002731_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os11g41875
Cluster	HCCA clusters: cluster_0106

Target	Alias	Description	ECC score	Gene Family Method
Brara.I03024.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Kfl00395_0050	kfl00395_0050_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Potri.003G171100	No alias	Ribosome associated membrane protein RAMP4	0.02	Orthogroups_2024-Update
Pp1s27_376V6	No alias	membrane protein	0.02	Orthogroups_2024-Update
Seita.3G351800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
evm.model.tig00000900.17	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004659	prenyltransferase activity	IEP	Predicted GO
MF	GO:0008318	protein prenyltransferase activity	IEP	Predicted GO
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
BP	GO:0018342	protein prenylation	IEP	Predicted GO
CC	GO:0031011	Ino80 complex	IEP	Predicted GO
CC	GO:0033202	DNA helicase complex	IEP	Predicted GO
CC	GO:0044454	nuclear chromosome part	IEP	Predicted GO
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Predicted GO
CC	GO:0097346	INO80-type complex	IEP	Predicted GO
BP	GO:0097354	prenylation	IEP	Predicted GO
CC	GO:1904949	ATPase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010580	ER_stress-assoc	15	72

External Links

No external refs found!