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  5. Solyc01g090750

Solyc01g090750


Description : T-complex protein 1 alpha subunit (AHRD V3.3 *** AT3G20050.1)


Gene families : OG_42_0004155 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g090750
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At3g20050 No alias T-complex protein 1 subunit alpha... 0.03 Orthogroups_2024-Update
Bradi1g49760 No alias T-complex protein 1 alpha subunit 0.03 Orthogroups_2024-Update
Bradi5g17750 No alias T-complex protein 1 alpha subunit 0.04 Orthogroups_2024-Update
Brara.E02197.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.05 Orthogroups_2024-Update
Cre10.g439100 No alias T-complex protein 1 alpha subunit 0.02 Orthogroups_2024-Update
Glyma.05G165500 No alias T-complex protein 1 alpha subunit 0.03 Orthogroups_2024-Update
HORVU7Hr1G044070.2 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.05 Orthogroups_2024-Update
Mp7g01530.1 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.04 Orthogroups_2024-Update
PSME_00016794-RA No alias (at3g20050 : 328.0) Encodes a putative cytoplasmic... 0.03 Orthogroups_2024-Update
Potri.014G058500 No alias T-complex protein 1 alpha subunit 0.04 Orthogroups_2024-Update
Seita.4G052500.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.05 Orthogroups_2024-Update
Seita.7G190300.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.05 Orthogroups_2024-Update
Sobic.004G326600.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.03 Orthogroups_2024-Update
Sopen01g036480 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
evm.model.tig00021350.16 No alias (at3g20050 : 727.0) Encodes a putative cytoplasmic... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 31 535
No external refs found!