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  5. Solyc09g010520

Solyc09g010520


Description : ADP-ribosylation factor GTPase-activating protein (AHRD V3.3 *** A0A0K9Q1P3_ZOSMR)


Gene families : OG_42_0003832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g010520
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G172700 No alias ARF-GAP domain 7 0.05 Orthogroups_2024-Update
LOC_Os03g17020 No alias GTPase-activating protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 6 102
No external refs found!