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  5. LOC_Os12g32880

LOC_Os12g32880


Description : plant protein of unknown function domain containing protein, expressed


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g32880
Cluster HCCA clusters: cluster_0031

Target Alias Description ECC score Gene Family Method Actions
Bradi3g41560 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Brara.D02221.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10428282g0010 No alias (at3g50170 : 135.0) Plant protein of unknown function... 0.03 Orthogroups_2024-Update
MA_109716g0010 No alias (at3g50170 : 195.0) Plant protein of unknown function... 0.02 Orthogroups_2024-Update
Potri.006G043000 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Potri.T087400 No alias Function unknown 0.02 Orthogroups_2024-Update
Potri.T138600 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Solyc01g057260 No alias transmembrane protein, putative (DUF247) (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc04g008900 No alias transmembrane protein, putative (DUF247) (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g008910 No alias transmembrane protein, putative (DUF247) (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 8 408
No external refs found!