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  5. LOC_Os12g37840

LOC_Os12g37840


Description : boron transporter protein, putative, expressed


Gene families : OG_42_0000732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g37840
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
78956 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
A4A49_04653 No alias putative boron transporter 7 0.03 Orthogroups_2024-Update
A4A49_19376 No alias boron transporter 1 0.05 Orthogroups_2024-Update
At1g15460 No alias BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7] 0.03 Orthogroups_2024-Update
At3g06450 No alias HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A0A178V9G0] 0.03 Orthogroups_2024-Update
Cre10.g443900 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
GRMZM2G051753 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
Glyma.03G222300 No alias HCO3- transporter family 0.03 Orthogroups_2024-Update
Glyma.04G069500 No alias HCO3- transporter family 0.03 Orthogroups_2024-Update
Glyma.15G011200 No alias HCO3- transporter family 0.01 Orthogroups_2024-Update
Glyma.17G088800 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
HORVU1Hr1G025890.7 No alias borate transporter *(BOR) 0.02 Orthogroups_2024-Update
Kfl00338_0030 kfl00338_0030_v1.1 (at3g06450 : 504.0) HCO3- transporter family; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00011316-RA No alias (at3g62270 : 780.0) HCO3- transporter family; FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.006G249800 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
Solyc01g079150 No alias Boron transporter (AHRD V3.3 *** B6V758_VITVI) 0.02 Orthogroups_2024-Update
Sopen01g030920 No alias HCO3- transporter family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR011531 HCO3_transpt_C 460 550
IPR011531 HCO3_transpt_C 201 372
IPR011531 HCO3_transpt_C 5 179
No external refs found!