LOC_Os12g39220


Description : ZOS12-08 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g39220
Cluster HCCA clusters: cluster_0145

Target Alias Description ECC score Gene Family Method Actions
A4A49_05911 No alias putative transcriptional regulator rabbit ears 0.02 Orthogroups_2024-Update
A4A49_12907 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
A4A49_18298 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
At5g25160 No alias ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56] 0.03 Orthogroups_2024-Update
Bradi1g22820 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Bradi1g58540 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Bradi1g58550 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Brara.B03462.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.G01776.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Glyma.07G025300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G107400 No alias zinc finger protein 8 0.02 Orthogroups_2024-Update
Glyma.15G004100 No alias zinc-finger protein 1 0.02 Orthogroups_2024-Update
Glyma.17G155600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G295500 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Glyma.19G162500 No alias zinc finger protein 11 0.03 Orthogroups_2024-Update
HORVU0Hr1G008920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g08600 No alias ZOS4-05 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
Potri.001G298700 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Potri.002G041700 No alias zinc finger protein 11 0.03 Orthogroups_2024-Update
Potri.003G180600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G221500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G164100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G122400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G123700 No alias zinc finger protein 6 0.02 Orthogroups_2024-Update
Seita.5G090200.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.9G170900.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G169700.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G036800.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc05g009170 No alias Zinc finger family protein (AHRD V3.3 *** B9HWF8_POPTR) 0.02 Orthogroups_2024-Update
Sopen01g001230 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen09g024930 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!