1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g002201

Cre01.g002201


Description : las1-like family protein


Gene families : OG_42_0006441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre01.g002201
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
At5g12220 No alias Las1-like family protein [Source:UniProtKB/TrEMBL;Acc:F4JZH9] 0.02 Orthogroups_2024-Update
Sobic.003G329200.1 No alias LAS1 pre-rRNA cleavage factor involved in ITS2 rRNA removal 0.02 Orthogroups_2024-Update
Solyc07g045370 No alias Las1-like family protein (AHRD V3.3 *** B9HNI6_POPTR) 0.02 Orthogroups_2024-Update
Sopen07g023910 No alias Las1-like 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0031418 L-ascorbic acid binding IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007174 Las1 6 227
No external refs found!