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  5. Cre01.g003450

Cre01.g003450


Description : Function unknown


Gene families : OG_42_0001679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre01.g003450
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G160800 No alias histone-lysine N-methyltransferases 0.02 Orthogroups_2024-Update
Glyma.13G236800 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update
Glyma.15G076800 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.03 Orthogroups_2024-Update
PSME_00015153-RA No alias (at1g26240 : 169.0) Proline-rich extensin-like family... 0.02 Orthogroups_2024-Update
Seita.9G490700.1 No alias component *(FES1) of FRI-C transcription effector complex 0.02 Orthogroups_2024-Update
Sopen06g026730 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!