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  5. Cre02.g078150

Cre02.g078150


Description : WD40/YVTN repeat-like-containing domain;Bromodomain


Gene families : OG_42_0003953 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003953_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre02.g078150
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
At2g47410 No alias WD40/YVTN repeat-like-containing domain;Bromodomain... 0.02 Orthogroups_2024-Update
Bradi5g22017 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.01 Orthogroups_2024-Update
Glyma.02G012900 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.02 Orthogroups_2024-Update
Glyma.09G037300 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.01 Orthogroups_2024-Update
Glyma.10G013500 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.03 Orthogroups_2024-Update
Glyma.15G142600 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.01 Orthogroups_2024-Update
Sobic.003G059750.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Sopen01g026220 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001733 galactosylceramide sulfotransferase activity IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005794 Golgi apparatus IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0050694 galactose 3-O-sulfotransferase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 1942 1995
IPR001680 WD40_repeat 210 246
IPR001680 WD40_repeat 252 288
IPR001680 WD40_repeat 534 557
IPR001680 WD40_repeat 799 830
IPR001680 WD40_repeat 295 333
No external refs found!