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  5. Solyc01g091470

Solyc01g091470


Description : AT hook motif DNA-binding family protein (AHRD V3.3 *** A0A072TPA5_MEDTR)


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g091470
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_08907 No alias at-hook motif nuclear-localized protein 24 0.03 Orthogroups_2024-Update
A4A49_14176 No alias at-hook motif nuclear-localized protein 26 0.03 Orthogroups_2024-Update
GRMZM2G035077 No alias AT-hook motif nuclear-localized protein 22 0.05 Orthogroups_2024-Update
GRMZM2G300111 No alias Predicted AT-hook DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.01G144400 No alias AT-hook motif nuclear-localized protein 22 0.03 Orthogroups_2024-Update
LOC_Os01g72450 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g22100 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_105458g0010 No alias (at2g45430 : 164.0) Encodes a nuclear localized AT hook... 0.03 Orthogroups_2024-Update
Pp1s7_185V6 No alias FCAALL.129; DNA-binding protein-related [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc09g089620 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 112 224
No external refs found!