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  5. Cre03.g179860

Cre03.g179860


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG_42_0003296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre03.g179860
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Bradi4g32840 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.01 Orthogroups_2024-Update
Brara.A00088.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.01 Orthogroups_2024-Update
GRMZM2G063517 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.01 Orthogroups_2024-Update
Glyma.05G176233 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.01 Orthogroups_2024-Update
Glyma.08G133700 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
Kfl00387_0100 kfl00387_0100_v1.1 (at2g22400 : 427.0) S-adenosyl-L-methionine-dependent... 0.02 Orthogroups_2024-Update
LOC_Os09g29630 No alias NOL1/NOP2/sun family protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g05200.1 No alias tRNA cytidine-methyltransferase (TRM4) 0.02 Orthogroups_2024-Update
Seita.2G240300.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.08 Orthogroups_2024-Update
Sobic.002G234300.1 No alias tRNA cytidine-methyltransferase *(TRM4) & EC_2.1... 0.1 Orthogroups_2024-Update
Solyc05g051520 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.01 Orthogroups_2024-Update
Sopen05g029940 No alias NOL1/NOP2/sun family 0.02 Orthogroups_2024-Update
evm.model.contig_2502.18 No alias (at2g22400 : 307.0) S-adenosyl-L-methionine-dependent... 0.03 Orthogroups_2024-Update
evm.model.tig00020562.25 No alias (at4g40000 : 302.0) S-adenosyl-L-methionine-dependent... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0036265 RNA (guanine-N7)-methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 172 431
No external refs found!