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  5. Cre06.g261000

Cre06.g261000


Description : photosystem II subunit R


Gene families : OG_42_0002845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre06.g261000
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
231914 No alias photosystem II subunit R 0.01 Orthogroups_2024-Update
A4A49_20557 No alias photosystem ii 10 kda polypeptide, chloroplastic 0.11 Orthogroups_2024-Update
Bradi3g17640 No alias photosystem II subunit R 0.02 Orthogroups_2024-Update
Brara.G02097.1 No alias component *(PsbR) of PS-II complex 0.03 Orthogroups_2024-Update
Brara.G03632.1 No alias component *(PsbR) of PS-II complex 0.02 Orthogroups_2024-Update
Glyma.08G173700 No alias photosystem II subunit R 0.11 Orthogroups_2024-Update
Glyma.15G253700 No alias photosystem II subunit R 0.17 Orthogroups_2024-Update
Kfl00098_0060 kfl00098_0060_v1.1 (q40070|psbr_horvu : 102.0) Photosystem II 10 kDa... 0.06 Orthogroups_2024-Update
MA_282g0010 No alias (p06183|psbr_soltu : 160.0) Photosystem II 10 kDa... 0.07 Orthogroups_2024-Update
Mp3g05840.1 No alias component PsbR of PS-II complex 0.05 Orthogroups_2024-Update
PSME_00052718-RA No alias (p06183|psbr_soltu : 146.0) Photosystem II 10 kDa... 0.04 Orthogroups_2024-Update
Potri.001G438700 No alias photosystem II subunit R 0.02 Orthogroups_2024-Update
Pp1s15_409V6 No alias photosystem ii 10 kda polypeptide 0.04 Orthogroups_2024-Update
Pp1s41_264V6 No alias photosystem ii 10 kda polypeptide 0.04 Orthogroups_2024-Update
Pp1s54_166V6 No alias photosystem ii 10 kda polypeptide 0.04 Orthogroups_2024-Update
Pp1s54_167V6 No alias photosystem ii 10 kda polypeptide 0.04 Orthogroups_2024-Update
Seita.6G032200.1 No alias component *(PsbR) of PS-II complex 0.03 Orthogroups_2024-Update
Sobic.007G071500.1 No alias component *(PsbR) of PS-II complex 0.06 Orthogroups_2024-Update
Solyc07g066310 No alias Photosystem II 10 kDa polypeptide family protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen07g034490 No alias Photosystem II 10 kDa polypeptide PsbR 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0042651 thylakoid membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 51 139
No external refs found!