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  5. Cre09.g391949

Cre09.g391949


Description : U2 snRNP auxilliary factor, large subunit, splicing factor


Gene families : OG_42_0001657 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001657_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Chlamydomonas release: Cre09.g391949
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
160385 No alias U2 snRNP auxilliary factor, large subunit, splicing factor 0.02 Orthogroups_2024-Update
Brara.H01687.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Orthogroups_2024-Update
HORVU4Hr1G038850.4 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Orthogroups_2024-Update
Mp6g18910.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 Orthogroups_2024-Update
Seita.8G236800.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 313 382
IPR000504 RRM_dom 179 250
No external refs found!