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  5. Cre09.g394399

Cre09.g394399


Description : Sas10/U3 ribonucleoprotein (Utp) family protein


Gene families : OG_42_0001862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre09.g394399
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
405212 No alias Sas10/U3 ribonucleoprotein (Utp) family protein 0.03 Orthogroups_2024-Update
At2g43650 No alias Sas10/U3 ribonucleoprotein (Utp) family protein... 0.04 Orthogroups_2024-Update
Bradi2g13337 No alias Sas10/U3 ribonucleoprotein (Utp) family protein 0.13 Orthogroups_2024-Update
Bradi2g59260 No alias Sas10/Utp3/C1D family 0.09 Orthogroups_2024-Update
Brara.C02216.1 No alias regulatory protein *(THAL) of rRNA transcription control 0.13 Orthogroups_2024-Update
GRMZM5G856434 No alias Sas10/Utp3/C1D family 0.01 Orthogroups_2024-Update
Glyma.07G208300 No alias Sas10/U3 ribonucleoprotein (Utp) family protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G092560.2 No alias regulatory protein *(THAL) of rRNA transcription control 0.04 Orthogroups_2024-Update
Kfl00986_0030 kfl00986_0030_v1.1 (at1g07840 : 147.0) Sas10/Utp3/C1D family; CONTAINS... 0.02 Orthogroups_2024-Update
LOC_Os01g01510 No alias sas10/Utp3 family protein, expressed 0.02 Orthogroups_2024-Update
Mp4g18120.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
PSME_00024320-RA No alias (at1g07840 : 238.0) Sas10/Utp3/C1D family; CONTAINS... 0.01 Orthogroups_2024-Update
Potri.005G152200 No alias Sas10/Utp3/C1D family 0.01 Orthogroups_2024-Update
Pp1s37_117V6 No alias u3 snornp protein 0.02 Orthogroups_2024-Update
Seita.2G273300.1 No alias regulatory protein *(THAL) of rRNA transcription control 0.07 Orthogroups_2024-Update
Seita.5G423500.1 No alias Unknown function 0.15 Orthogroups_2024-Update
Sobic.003G397700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G217100.1 No alias regulatory protein *(THAL) of rRNA transcription control 0.05 Orthogroups_2024-Update
Solyc11g072390 No alias Something about silencing protein sas10, putative (AHRD... 0.01 Orthogroups_2024-Update
Sopen04g030280 No alias Sas10/Utp3/C1D family 0.01 Orthogroups_2024-Update
evm.model.contig_2062.9 No alias (original description: no original description) 0.09 Orthogroups_2024-Update
evm.model.tig00022075.45 No alias (at2g43650 : 99.0) EMBRYO DEFECTIVE 2777 (EMB2777);... 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007146 Sas10/Utp3/C1D 272 352
IPR018972 Sas10_C_dom 719 792
No external refs found!