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  5. Cre10.g452100

Cre10.g452100


Description : photosystem II BY


Gene families : OG_42_0005644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre10.g452100
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
441673 No alias photosystem II BY 0.01 Orthogroups_2024-Update
A4A49_36701 No alias photosystem ii core complex proteins psby, chloroplastic 0.09 Orthogroups_2024-Update
At1g67740 No alias Putative uncharacterized protein... 0.05 Orthogroups_2024-Update
Bradi3g13970 No alias photosystem II BY 0.06 Orthogroups_2024-Update
Brara.G02733.1 No alias component *(PsbY) of PS-II complex 0.1 Orthogroups_2024-Update
Glyma.05G172300 No alias photosystem II BY 0.07 Orthogroups_2024-Update
Glyma.11G245400 No alias photosystem II BY 0.05 Orthogroups_2024-Update
Kfl00370_0100 kfl00370_0100_v1.1 no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_12201g0010 No alias (at1g67740 : 114.0) PsbY precursor (psbY) mRNA. This... 0.05 Orthogroups_2024-Update
Mp8g12730.1 No alias component PsbY of PS-II complex 0.02 Orthogroups_2024-Update
Pp1s101_95V6 No alias photosystem ii protein 0.05 Orthogroups_2024-Update
Pp1s221_76V6 No alias photosystem ii protein 0.09 Orthogroups_2024-Update
Seita.6G082000.1 No alias component *(PsbY) of PS-II complex 0.05 Orthogroups_2024-Update
Sobic.007G023300.1 No alias component *(PsbY) of PS-II complex 0.04 Orthogroups_2024-Update
Solyc10g077120 No alias Photosystem II core complex proteins psbY (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen10g028800 No alias Photosystem II protein Y (PsbY) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0030145 manganese ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 223 254
IPR009388 PSII_PsbY 152 183
IPR009388 PSII_PsbY 294 325
IPR009388 PSII_PsbY 365 387
No external refs found!