Solyc09g075160

Description : 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH)

Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc09g075160
Cluster	HCCA clusters: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
270704	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
A4A49_00389	No alias	60s ribosomal protein l22-2	0.04	Orthogroups_2024-Update
Bradi1g62830	No alias	Ribosomal L22e protein family	0.03	Orthogroups_2024-Update
Brara.A03699.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.C03109.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Brara.E03358.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.F02844.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre07.g357850	No alias	Ribosomal L22e protein family	0.09	Orthogroups_2024-Update
GRMZM2G063617	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
GRMZM2G134107	No alias	Ribosomal L22e protein family	0.02	Orthogroups_2024-Update
Glyma.02G017800	No alias	Ribosomal L22e protein family	0.06	Orthogroups_2024-Update
Glyma.03G235000	No alias	Ribosomal L22e protein family	0.03	Orthogroups_2024-Update
Glyma.10G018200	No alias	Ribosomal L22e protein family	0.06	Orthogroups_2024-Update
Glyma.19G232700	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
HORVU2Hr1G019160.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
HORVU7Hr1G080630.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Kfl00104_0130	kfl00104_0130_v1.1	(at5g27770 : 144.0) Ribosomal L22e protein family;...	0.02	Orthogroups_2024-Update
Mp4g02920.1	No alias	component RPL22 of LSU proteome component	0.03	Orthogroups_2024-Update
Potri.005G024400	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
Potri.010G012700	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
Potri.013G015300	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
Potri.014G128800	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
Pp1s283_20V6	No alias	60s ribosomal protein	0.05	Orthogroups_2024-Update
Pp1s457_15V6	No alias	60s ribosomal protein	0.11	Orthogroups_2024-Update
Seita.2G429500.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Seita.9G409100.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Sobic.001G376600.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Sobic.002G414700.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Sopen01g043340	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
Sopen09g029970	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
Sopen09g029980	No alias	Ribosomal L22e protein family	0.06	Orthogroups_2024-Update
evm.model.contig_2121.19	No alias	(at3g05560 : 87.0) Ribosomal L22e protein family;...	0.1	Orthogroups_2024-Update
evm.model.tig00001206.7	No alias	(at3g05560 : 112.0) Ribosomal L22e protein family;...	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0032259	methylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002671	Ribosomal_L22e	15	123

External Links

No external refs found!

Solyc09g075160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation