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  5. Cre13.g577500

Cre13.g577500


Description : Vesicle transport v-SNARE family protein


Gene families : OG_42_0001748 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre13.g577500
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
146421 No alias Vesicle transport v-SNARE family protein 0.02 Orthogroups_2024-Update
Brara.D00969.1 No alias Qb-type VTI-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
PSME_00011835-RA No alias (at5g39510 : 113.0) Encodes a member of SNARE gene... 0.02 Orthogroups_2024-Update
Solyc03g115760 No alias Vesicle transport v-SNARE protein (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 15 93
No external refs found!