Cre13.g579598


Description : starch synthase 3


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre13.g579598
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Bradi5g22310 No alias starch synthase 3 0.02 Orthogroups_2024-Update
Glyma.08G082600 No alias starch synthase 4 0.03 Orthogroups_2024-Update
Kfl00004_0550 kfl00004_0550_v1.1 (at4g18240 : 457.0) starch synthase 4 (SS4); FUNCTIONS... 0.02 Orthogroups_2024-Update
Kfl00029_0180 kfl00029_0180_v1.1 (at4g18240 : 447.0) starch synthase 4 (SS4); FUNCTIONS... 0.02 Orthogroups_2024-Update
Mp2g20000.1 No alias starch synthase (SSIII) 0.02 Orthogroups_2024-Update
Pp1s104_147V6 No alias soluble starch synthase iv-2 0.01 Orthogroups_2024-Update
Pp1s2_195V6 No alias soluble starch synthase iv-2 0.01 Orthogroups_2024-Update
Seita.1G359000.1 No alias starch synthase *(SS5) 0.01 Orthogroups_2024-Update
Sobic.007G068200.1 No alias starch synthase *(SS3) 0.02 Orthogroups_2024-Update
Sobic.009G209300.1 No alias starch synthase *(SS4) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006189 'de novo' IMP biosynthetic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 218 340
IPR013534 Starch_synth_cat_dom 1 130
No external refs found!