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  5. Cre13.g583500

Cre13.g583500


Description : TBP-associated factor 2


Gene families : OG_42_0005009 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre13.g583500
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G013400 No alias TBP-associated factor 2 0.02 Orthogroups_2024-Update
HORVU2Hr1G123490.1 No alias component *(TAF2) of TFIId basal transcription... 0.02 Orthogroups_2024-Update
HORVU5Hr1G061200.18 No alias component *(TAF2) of TFIId basal transcription regulation complex 0.02 Orthogroups_2024-Update
Solyc03g119780 No alias Transcription initiation factor TFIID subunit 2 (AHRD... 0.02 Orthogroups_2024-Update
evm.model.contig_4419.12 No alias (at1g73960 : 119.0) TBP-associated factor 2 (TAF2);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!